References

Nanotechnology References:

Annotated Bibs:

Dip:

Chen, Jem-Kun, and Jun-Yan Li. “Fabrication of DNA Extraction Device with Tethered Poly(N-isopropylacrylamide) Brushes on Silicon Surface for a Specific DNA Detection.” Sensors and Actuators B: Chemical 150.1 (2010): 314-20. Web.

Böhm, Konrad J., Roland Stracke, Peter Mühlig, and Eberhard Unger. “Motor Protein-driven Unidirectional Transport of Micrometer-sized Cargoes across Isopolar Microtubule Arrays.”Nanotechnology 12.3 (2001): 238-44. Web.

Vaijayanthimala, Vairakkannu, Yan-Kai Tzeng, Huan-Cheng Chang, and Chung-Leung Li. “The Biocompatibility of Fluorescent Nanodiamonds and Their Mechanism of Cellular Uptake.” Nanotechnology 20.42 (2009): 425103. Web.

Cheong, Kwang Ho, Dong Kee Yi, Jeong-Gun Lee, Jong-Myeon Park, Min Jun Kim, Joshua B. Edel, and Christopher Ko. “Gold Nanoparticles for One Step DNA Extraction and Real-time PCR of Pathogens in a Single Chamber.” Lab on a Chip Lab Chip 8.5 (2008): 810-14. Web.

Vivero-Escoto, Juan L., Igor I. Slowing, Chian-Wen Wu, and Victor S.-Y. Lin. “Photoinduced Intracellular Controlled Release Drug Delivery in Human Cells by Gold-Capped Mesoporous Silica Nanosphere.” J. Am. Chem. Soc. Journal of the American Chemical Society 131.10 (2009): 3462-463. Web.

Eman:

Decuzzi, Paolo. “Patient-Specific Computational Modeling and Magnetic Nanoconstructs: Tools for Maximizing the Efficacy of Stem Cell-Based Therapies.” Methodist DeBakey Cardiovascular Journal 9.4 (2013): 223-28. Web.

Dibbern, A.g., B.g. Botaro, M.p. Viziack, L.f.p. Silva, and M.v. Santos. “Evaluation of Methods of DNA Extraction from Staphylococcus Aureus in Milk for Use in Real-time PCR.” Genetics and Molecular Research Genet. Mol. Res. 14.1 (2015): 227-33. Web.

George, Saji, Shirley S. Ho, Esther S. P. Wong, Timothy Thatt Yang Tan, Navin Kumar Verma, Robert J. Aitken, Michael Riediker, Christopher Cummings, Liya Yu, Zheng Ming Wang, Daniele Zink, Zhihan Ng, Say Chye Joachim Loo, and Kee Woei Ng. “The Multi-facets of Sustainable Nanotechnology – Lessons from a Nanosafety Symposium.”Nanotoxicology 9.3 (2015): 404-06. Web.

Koontz, D., K. Baecher, M. Amin, S. Nikolova, M. Gallagher, and S. Dollard. “Evaluation of DNA Extraction Methods for the Detection of Cytomegalovirus in Dried Blood Spots.” Journal of Clinical Virology 66 (2015): 95-99. Web.

Popovtzer, Rachela, Tova Neufeld, Eliora Z. Ron, Judith Rishpon, and Yosi Shacham-Diamand.         “Electrochemical ‘Lab on a Chip’ for Toxicity Detection in Water.” NSTI-Nanotech 2         (2006): 205-08. Web.

Meghan:

  1. Mousa, Shaker A., and Dhruba J. Bharali. “Nanotechnology-Based Detection and Targeted Therapy in Cancer: Nano-Bio Paradigms and Applications.” Cancers 3.3 (2011): 2888. Web.
  1. Mousa, Shaker A., and Dhruba J. Bharali. “Nanotechnology-Based Detection and Targeted Therapy in Cancer: Nano-Bio Paradigms and Applications.” Cancers 3.3 (2011): 2888. Web.
  1. Kelly, Shana O. “Disease Detector.”Scientific American 313.5 (2015): 48-51.Consumer Health Complete [EBSCO]. Web.
  1. Singh, Shinjini, Mritunjai Singh, and I.S. Gambhir. “Nanotechnology for Alzheimer’s Disease Detection.” Digest Journal of Nanomaterials and Biostructures 3 (2008): 75-79. Web.
  1. Van Den Berg, Albert. “Labs on a Chip for Health Care Applications.” 14th International Conference on Miniature Systems for Chemistry and Life Sciences (2010): 4-6. Web.

Design Stage 2:

1. Ai, Ye, Sinan E. Yalcin, Diefeng Gu, Oktay Baysal, Helmut Baumgart, Shizhi Qian, and Ali Beskok. “A Low-voltage Nano-porous Electroosmotic Pump.” Journal of Colloid and Interface Science350.2 (2010): 465-70. Web.

2. Chen, Jem-Kun, and Jun-Yan Li. “Fabrication of DNA Extraction Device with Tethered Poly(N-isopropylacrylamide) Brushes on Silicon Surface for a Specific DNA Detection.” Sensors and Actuators B: Chemical 150.1 (2010): 314-20. Web.

3. Oda, Mayumi, and John M. Greally. “The Help Assay.” Methods in Molecular Biology DNA Methylation (2009): 77-87. Web.

Design Stage 3:

  1. “Statistics | Leukemia Research Foundation.” Statistics | Leukemia Research Foundation. Leukemia Research Foundation, n.d. Web. 08 Apr. 2016.
  1. Oda, Mayumi, and John M. Greally. “The Help Assay.” Methods in Molecular Biology DNA Methylation (2009): 77-87. Web.
  1. Wit, Sanne De, Guus Van Dalum, Aufried T. M. Lenferink, Arjan G. J. Tibbe, T. Jeroen N. Hiltermann, Harry J. M. Groen, Cees J. M. Van Rijn, and Leon W. M. M. Terstappen. “The Detection of EpCAM and EpCAM– Circulating Tumor Cells.” Scientific Reports 5 (2015): 1-10. Web.
  1. Ai, Ye, Sinan E. Yalcin, Diefeng Gu, Oktay Baysal, Helmut Baumgart, Shizhi Qian, and Ali Beskok. “A Low-voltage Nano-porous Electroosmotic Pump.” Journal of Colloid and Interface Science350.2 (2010): 465-70. Web.
  2. Chen, Jem-Kun, and Jun-Yan Li. “Fabrication of DNA Extraction Device with Tethered Poly(N-isopropylacrylamide) Brushes on Silicon Surface for a Specific DNA Detection.” Sensors and Actuators B: Chemical 150.1 (2010): 314-20. Web.
  3. Thompson, R. F., M. Reimers, B. Khulan, M. Gissot, T. A. Richmond, Q. Chen, X. Zheng, K. Kim, and J. M. Greally. “An Analytical Pipeline for Genomic Representations Used for Cytosine Methylation Studies.” Bioinformatics 24.9 (2008): 1161-167. Web.

Poster Presentation:

[1]  “How Is Acute Lymphocytic Leukemia Diagnosed?”  American Cancer Society. American Cancer Society, n.d. Web. 10 Apr. 2016.

[2]  Weiss, Jared, Dr. “An Introduction to the Concept of Circulating Tumor Cells.” Global Resource for Advancing Cancer Education. GRACE, n.d. Web. 10 Apr. 2016.

[3] Kumar, Chandra C. “Genetic Abnormalities and Challenges in the Treatment of Acute Myeloid Leukemia.” Genes & Cancer (n.d.): n. pag. National Center for Biotechnology Information. Web. 10 Apr. 2016.

[4] Thompson, R. F., M. Reimers, B. Khulan, M. Gissot, T. A. Richmond, Q. Chen, X. Zheng, K. Kim, and J. M. Greally. “An Analytical Pipeline for Genomic Representations Used for Cytosine Methylation Studies.” Bioinformatics 24.9 (2008): 1161-167. Web.

Project Report:

[1]      Team Website. www.u.osu.edu/feh16y2

[2]     “Cancer Facts and Figures 2016.” The American Cancer Society. The American Cancer Society, n.d. Web. 10 Apr. 2016.

[3]     “How Is Acute Lymphocytic Leukemia Diagnosed?” American Cancer Society. American Cancer Society, n.d. Web. 10 Apr. 2016.

[4]     “Facts 2014-2015.” Leukemia and Lymphoma Society. N.p., n.d. Web. 10 Apr. 2016.

[5]     “Leukemia – Treatment Overview.” WebMD. WebMD, LLC, n.d. Web. 10 Apr. 2016.

[6]     McKay, Lorraine I., and John A. Cidlowski. Corticosteroids in the Treatment of

Neoplasms. 6th ed. N.p.: Hamilton, n.d. National Center for Biotechnology Information. Web. 10 Apr. 2016.

[7]     “What Is a Stem Cell Transplant (Bone Marrow Transplant)?” Cancer.net. American Society of Clinical Oncology, Jan. 2016. Web. 10 Apr. 2016.

[8]     Kumar, Chandra C. “Genetic Abnormalities and Challenges in the Treatment of Acute Myeloid Leukemia.” Genes & Cancer (n.d.): n. pag. National Center for Biotechnology Information. Web. 10 Apr. 2016.

[9]     Weiss, Jared, Dr. “An Introduction to the Concept of Circulating Tumor Cells.” Global Resource for Advancing Cancer Education. GRACE, n.d. Web. 10 Apr. 2016.

[10]     Nagrath, Sunitha, Lecia Sequist, Shyamala Maheswaran, Daphne Bell, Daniel Irimia, Lindsey Ulkus, Matthew Smith, Eunice Kwak, Subba Digumarthy, Alona Musikansky, Paula Ryan, Ulysses Balis, Ronald Tompkins, Daniel Haber, and Mehmet Toner. “Isolation of Rare Circulating Tumour Cells in Cancer Patients by Microchip Technology.” HHS Author Manuscripts (2011): n. pag. National Center for Biotechnology Information. Web. 10 Apr. 2016.

[11]      Nanotechnology Problem Statement. www.carmen.osu.edu

[12]     Wit, Sanne De, Guus Van Dalum, Aufried T. M. Lenferink, Arjan G. J. Tibbe, T. Jeroen N. Hiltermann, Harry J. M. Groen, Cees J. M. Van Rijn, and Leon W. M. M. Terstappen. “The Detection of EpCAM and EpCAM– Circulating Tumor Cells.” Scientific Reports 5 (2015): 1-10. Web.

[13]     Ai, Ye, Sinan E. Yalcin, Diefeng Gu, Oktay Baysal, Helmut Baumgart, Shizhi Qian, and Ali Beskok. “A Low-voltage Nano-porous Electroosmotic Pump.” Journal of Colloid and Interface Science350.2 (2010): 465-70. Web.

[14]    Chen, Jem-Kun, and Jun-Yan Li. “Fabrication of DNA Extraction Device with Tethered Poly(N-isopropylacrylamide) Brushes on Silicon Surface for a Specific DNA Detection.” Sensors and Actuators B: Chemical 150.1 (2010): 314-20. Web.

[15]     Thompson, R. F., M. Reimers, B. Khulan, M. Gissot, T. A. Richmond, Q. Chen, X. Zheng, K. Kim, and J. M. Greally. “An Analytical Pipeline for Genomic Representations Used for Cytosine Methylation Studies.” Bioinformatics 24.9 (2008): 1161-167. Web.

 

Microfluidics References:

Annotated Bibs:

Dip:

Osborn, Laurelee, Catherine Hession, Richard Tizard, Cornelia Vassallo, Stefan Luhowskyj, Gloria Chi-Rosso, and Roy Lobb. “Direct Expression Cloning of Vascular Cell Adhesion Molecule 1, a Cytokine-induced Endothelial Protein That Binds to Lymphocytes.”Cell 59.6 (1989): 1203-1211. Web.

Srinivasan, Vijay, Vamsee K. Pamula, and Richard B. Fair. “An Integrated Digital Microfluidic Lab-on-a-chip for Clinical Diagnostics on Human Physiological Fluids.” The Royal Society of Chemistry 4.4 (2004): 310-15. Web.

Balslev, S., A. M. Jorgensen, B. Bilenberg, K. B. Mogensen, D. Snakenborg, O. Geschke, J. P. Kutter, and A. Kristensen. “Lab-on-a-chip with Integrated Optical Transducers.” Lab Chip 6.2 (2006): 213-17. Web.

Eman:

Chen, Arnold, Royal Wang, Candace R. S. Bever, Siyuan Xing, Bruce D. Hammock, and Tingrui Pan. “Smartphone-interfaced Lab-on-a-chip Devices for Field-deployable Enzyme-linked Immunosorbent Assay.” Biomicrofluidics 8.6 (2014): 064101. Web.

Lee, Nae Yoon. “Recent Progress in Lab-on-a-Chip Technology and Its Potential Application to Clinical Diagnoses.”International Neurourology Journal Int Neurourol J 17.1 (2013): 2. Web.

Mucha, Andreas, Ulrich Bohrn, Meinrad Schienle, and Doris Schmitt-Landsiedel. “A CMOS Integrated Cell Adhesion Sensor for Lab-on-a-chip Applications.”Bioelectronics, Biomedical, and Bioinspired Systems V; and Nanotechnology V (2011): n. pag. Web.

Keenan:

Parikh, Kunal. “Nanopatterned Surfaces for the Exploration of Cell Behavior.” OSU Knowledge Bank. (2012) : 1-41.

Byvank, Tom. “Separating Magnetically Labeled and Unlabeled Biological Cells within Microfluidic Channels.” OSU Knowledge Bank. (2012) : 1-31.

Caggiano, Laura. “Modeling the Mechanical Properties of Pulmonary Alveoli with Fibrosis and Other Lung Diseases.” OSU Knowledge Bank. (2014) : 1-26.

Meghan:

  1. Schattner, Elaine. “A Chip Against Cancer.” Scientific American 300.4 (n.d.): 21-22.Consumer Health Complete [EBSCO]. Web. 21 Feb. 2016.
  1. Chen, Y., C. Crozatier, M. Le Berre, and Z. L. Zhang. “In Situ Bio-Functionalization and Cell Adhesion in Microfluidic Devices.”Microelectric Engineering 78-79 (2005): 556-62. Science Direct. Web. 21 Feb. 2016.
  1. Boahen, Kwabena. “Neuromorphic Microchips.”Scientific American 292.5 (n.d.): 56-63. Consumer Health Complete [EBSCO]. Web. 21 Feb. 2016.

Lab 3:

[1]        Lab 3 – Chip Molding, Demolding, and Yeast Adhesion Memo Requirements. 2016,                 March 21.www.carmen.osu.edu.

[2]        Supplemental Data for Lab 3. 2016, March 21.www.carmen.osu.edu.

[3]        Lab_Memo_Template_AU1. 2016, March 21.www.carmen.osu.edu

Oral Report:

  • Hynes, Richard O. “Cell Adhesion: Old and New Questions.” Trends in Cell Biology 9.12 (1999): n. pag. Elsevier Science Ltd. Web. 19 Apr. 2016.
  • “Lamina Propria.” TheFreeDictionary.com. Medical Dictionary for the Dental Professions, 2012. Web. 19 Apr. 2016.
  • Trafton, Anne. “How Cancer Cells Break Free From Tumors.” MIT News. Massachusetts Institute of Technology, 9 Oct. 201. Web. 19 Apr. 2016.
  • “The Role of Cell Adhesion Molecule in Cancer Progression and Its Application in Cancer Therapy.” Acta Biochim Pol 51 (2004): n. pag. National Center for Biotechnology Information. Web. 19 Apr. 2016.
  • Zhang, Di, Xiao Dou, Xiao Yang, Ping Li, Zhi Zhang, Holger Schonherr, and Chuan Feng. “Novel PH Responsive Hydrogels for Controlled Cell Adhesion and Triggered Surface Detachment.” Royal Society of Chemistry. Royal Society of Chemistry, 2012. Web. 19 Apr. 2016

Project Report:

[1]        “Blood PH.” MedicineNet. MedicineNet, 14 June 2012. Web. 23 Apr. 2016.

[2]        Bryers, James D. “Biofilms and the Technological Implications of Microbial Cell    Adhesion.” Biofilms and the Technological Implications of Microbial Cell Adhesion.      Elsevier B.V., n.d. Web. 12 Apr. 2016.

[3]        Garrett, Trevor Roger, Manmohan Bhakoo, and Zhibing Zhang. “Bacterial Adhesion and Biofilms on Surfaces.” Bacterial Adhesion and Biofilms on Surfaces. Elsevier Ltd, 2008.          Web. 12 Apr. 2016.

[4]        Lab 2: Microfluidics Flow Calibration Procedure. 31 March, 2016. www.carmen.osu.edu.

[5]        Lab 3 – Chip Fabrication and Yeast Cell Adhesion. 31 March, 2016.                                               www.carmen.osu.edu.

[6]        Mateo, Mathieu, Alex Generous, Patrick L. Sinn, and Roberto Cattaneo. “Connections

Matter- How Viruses Use Cell-Cell Adhesion Components.” The Journal of Cell Science 128 (2015): 431-39. The Company of Biologists. Web.

[7]        Mercier-Bonin, M., K. Ouazzani, P. Schmitz, and S. Lorthois. “Study of Bioadhesion on   a Flat Plate with a Yeast/glass Model System.” Journal of Colloid and Interface Science           271.2 (2003): 342-50. Web.

[8]        Murphy, Sheila. “BASIN: General Information on PH.” BASIN: General Information on PH. City of Boulder/USGS Water Quality Monitoring, 23 Apr. 2007. Web. 12 Apr. 2016.

[9]        Reece, Jane B., Lisa A. Urry, Michael L. Cain, Steven A. Wasserman, Peter V. Minorsky, and Robert B. Jackson. Campbell Biology. 10th ed. Boston: Pearson Education, 2014. Print.

[10]      Oram, Brian. “Water Quality, Drinking Water, Corrosion and Water PH.” Water Quality, Drinking Water, Corrosion and Water PH. Water Research Watershed Center, 2014.            Web. 12 Apr. 2016.

[11]      Zeromski, J., E. Nyczak, and W. Dyszkiewicz. “Significance of Cell Adhesion

Molecules: CD56/NCAM in Particular in Human Tumor Growth and Spreading.” PubMed.gov. US National Library of Medicine, n.d. Web. 30 Mar. 2016.

[12]      yeastcellcounter_menu. 14 April, 2016. www.carmen.osu.edu