Bauer Group Publications

* indicates student or postdoctoral advisee

*Kelsey, S., A.G. Grottoli, J.E. Bauer, K. Lorenz, R. Lal, Y. Matsui and T. M. Huey-Sanders. 2020.  Effects of agricultural and tillage practices on isotopic signatures and fluxes of organic and inorganic carbon in headwater streams. [PDF] Aquatic Sciences 82: 23, doi:10.1007/s00027-019-0691-7.

*Bellamy, A.R., J.E. Bauer and A.G. Grottoli. 2019.  Autochthonous, allochthonous, and aged carbon and organic matter contributions to macroinvertebrate nutrition in the Susquehanna River basin. [PDF] Freshwater Science 38: 616-628,

*Evans, T.M., *A.R. Bellamy and J.E. Bauer. 2019.  Radioisotope and stable isotope ratios (Δ14C, δ15N) suggest larval lamprey growth is dependent on both fresh and aged organic matter in streams. [PDF] Ecology of Freshwater Fish 28: 365-375, doi 10.1111/eff.124.

*Gougherty, S.W., J.E. Bauer and J.W. Pohlman. 2018.  Exudation rates and δ13C signatures of tree root soluble organic carbon in a riparian forest. [PDF] Biogeochemistry 137: 235-252,  doi 10.1007/s10533-017-0415-9.

*Bellamy, A.R. and J.E. Bauer. 2017.  Nutritional support of inland aquatic food webs by aged carbon and organic matter. [PDF] Limnology and Oceanography Letters 2: 131-149, doi 10.1002/lol2.10044.

*Bellamy, A.R., J.E. Bauer and A.G. Grottoli. 2017.  Influence of land use and lithology on sources and ages of nutritional resources for stream macroinvertebrates: a multi-isotopic approach. [PDF] Aquatic Sciences 79: 925–939, doi 10.1007/s00027-017-0542-3.

*Weber, A.M, J.E. Bauer and G. T. Watters. 2017. Assessment of nutritional subsidies to freshwater mussels using a multiple natural abundance isotope approach. [PDF] Freshwater Biology 62: 615-629, doi:10.1111/fwb.12890.
–the authors were awarded  the cover of this issue of Freshwater Biology [PDF], doi 10.1111/fwb.12905

*Levas, S., A.G. Grottoli, V. Schoepf, M. Aschaffenburg, J. Baumann, J.E. Bauer, and M.E. Warner.  2016.  Can heterotrophic uptake of dissolved organic carbon and zooplankton mitigate carbon budet deficits in annually bleached corals? [PDF]  Coral Reefs doi: 10.1007/s00338-015-1390-z.

*Evans, T.M. and J.E. Bauer.  2016. Identification of the nutritional resources of larval sea lamprey growth in two Great Lakes tributaries using stable isotopes. [PDF]  Journal of Great Lakes Research doi.10.1016/j.jglr.2015.11.010.

*Evans, T.M. and J.E. Bauer.  2016.  Using stable isotopes and C:N ratios to examine the life-history strategies and nutritional sources of larval lampreys. [PDF]  Journal of Fish Biology doi:10.1111/jfb.12858.

*Lu, Y., L. Xiaping, R. Mesfioui, J.E. Bauer, R.M Chambers, E.A. Canuel, and P. Hatcher.  2015.  Use of ESI-FTICR-MS to characterize dissolved organic matter in headwater streams draining forest-dominated and pasture-dominated watersheds. [PDF]  PLoS One doi:10.1016/j.jglr.2015.11.010.

*Levas, S., A.G. Grottoli, M.E. Warner, W.-J. Cal, J.E. Bauer, V. Schoepf, J.H. Baumann, Y. Matsui, C. Gearing, T.F. Melman, K.D. Hoadley, D.T. Pettay, Q. Li., X. Hu, and Y. Wang.  2015. Organic carbon fluxes mediated by corals at elevated pCO2 and temperature. Organic carbon fluxes mediated by corals at elevated pCO2 and temperature. [PDF]  Marine Ecology Progress Series 519: doi: 10.3354/meps11072.

*Lu, Y., J.E. Bauer, E.A. Canuel, R. Chambers Y. Yamashita, R. Jaffé and A. Barrett. 2014. Effects of land use on sources and ages of inorganic and organic carbon in temperate headwater streams. [PDF] Biogeochemistry 118: doi:10.1007/s10533-014-9965-2.

*Lu, Y., E.A. Canuel, J.E. Bauer and R. Chambers. 2014. Effects of watershed land use on sources and nutritional value of particulate organic matter in temperate headwater streams. [PDF] Aquatic Sciences 76: doi: 10.1007/s00027-014-0344-9.

Bauer, J.E., W.-J. Cai, P.A. Raymond, T.S. Bianchi, C.S. Hopkinson and P. Regnier. 2013. The changing carbon cycle of the coastal ocean. [PDF] Nature 504: 61-70.

— the authors were awarded the cover of this  Nature Coastal Regions issue [PDF]

Reimers, C.E., Y. Alleau, J.E. Bauer, J. Delaney, P. Girguis, P. Schrader and H.A. Stecher. 2013. Redox effects on the microbial degradation of refractory organic matter in marine sediments. [PDF] Geochimica et Cosmochimica Acta 121: 582-598.

Supplemental Materials for this paper

*Lu, Y., J.E. Bauer, E.A. Canuel, Y. Yamashita, R. Chambers and R. Jaffé. 2013. Photochemical and microbial alteration of dissolved organic matter in temperate headwater streams associated with different land use. [PDF] Journal of Geophysical Research-Biogeosciences 118, doi:10.1002/jgrg.20048.

— featured in EOS Research Spotlight, vol. 94, 14 June 2013

*Hossler, K.A. and J.E. Bauer. 2013. Amounts, isotopic character and ages of carbon and organic matter exported from rivers to ocean margins: 1. Estimates of terrestrial losses and inputs to the Middle Atlantic Bight. [PDF] Global Biogeochemical Cycles 27, doi:10.1002/gbc.20033.

Supplemental Materials for this paper

*Hossler, K.A. and J.E. Bauer. 2013. Amounts, isotopic character and ages of carbon and organic matter exported from rivers to ocean margins: 2. Assessment of natural and anthropogenic controls. [PDF] Global Biogeochemical Cycles 27, doi:10.1002/gbc.20034.

Supplemental Materials for this paper

*Pohlman, J.W., M. Riedel, J.E. Bauer, E.A. Canuel, C. Paull, L. Lapham, K.S. Grabowski, R. B. Coffin, and G.D. Spence. 2013. Anaerobic methane oxidation in low-organic content methane seep sediments. [PDF] Geochimica et Cosmochimica Acta doi: /10.1016/j.gca.2013.01.022.

Supplemental Materials for this paper

Jiang, L.-Q., W.-J. Cai, Y. Wang and J.E. Bauer. 2013. Influence of terrestrial inputs on continental shelf carbon dioxide. [PDF] Biogeosciences 10, 839-849, doi:10.5194/bg-10-839-2013.

Moyer, R.P.,J.E. Bauer, and A.G. Grottoli. 2013. Carbon isotope biogeochemistry of tropical small mountainous river, estuarine, and coastal systems of Puerto Rico. [PDF] Biogeochemistry 109, doi 10.1007/s10533-012-9751-y.

Supplemental Materials for this paper

*Hossler, K.A. and J.E. Bauer. 2012. Estimation of riverine carbon source contributions with time-based isotope mixing models. [PDF] Journal of Geophysical Research – Biogeosciences 117, G03035, doi:10.1029/2012JG001988.

Supplemental Materials for this paper

*Wozniak, A.S., J.E. Bauer, R.M. Dickhut, L. Xu and A.P. McNichol. 2012. Isotopic characterization of organic carbon components in eastern United States aerosol particulate matter. [PDF] Journal of Geophysical Research – Atmospheres 117, D13303, doi:10.1029/2011JD017153.

–Supplementary Materials for this paper: Intro document, Figure S1, Table S1, Table S2

*Wozniak, A.S., J.E. Bauer, and R.M. Dickhut. 2012. Characteristics of water-soluble organic carbon associated with aerosol particles in the eastern United States. [PDF] Atmospheric Environment 46: 181-188.

Supplementary Materials for this paper

*Wozniak, A.S., J.E. Bauer, and R.M. Dickhut. 2011. Fossil and contemporary aerosol particulate organic carbon in the eastern United States: Implications for deposition and inputs to watersheds. [PDF] Global Biogeochemical Cycles 25: GB2013, doi:10.1029/2010GB003855.

Supplementary Materials for this paper

Bauer, J.E. and T.S. Bianchi. 2011.Dissolved Organic Carbon Cycling and Transformation. [PDF] In: J. Middelburg and R. Laane (Eds.), Treatise on Estuarine and Coastal Science, Volume 5: Biogeochemistry. Elsevier Science Publishers, in press.

Bianchi, T.S. and J.E. Bauer. 2011.Particulate Organic Carbon Cycling and Transformation. [PDF] In: J. Middelburg and R. Laane (Eds.), Treatise on Estuarine and Coastal Science, Volume 5: Biogeochemistry. Elsevier Science Publishers, in press.

*Pohlman, J.W. and J.E. Bauer, William F. Waite, Christopher L. Osburn, and N. Ross Chapman. 2011. Methane hydrate-bearing seeps as a source of aged dissolved organic matter to the oceans. [PDF] Nature Geoscience 4: 37-41.

Supplementary Materials for this paper
— featured as a Nature Geoscience Editorial “Deep-Sea Discoveries”, vol. 4, p.1.
— featured as a Nature Geoscience News and Views story, “Oceanography: Carbon Cycle at Depth” by K. Edwards, vol. 4, p. 9-11.

Caraco, N.S., J.E. Bauer, J.J. Cole, P.A. Raymond and S. T. Petsch. 2010. Millenial-aged organic carbon subsidies to a modern river food web. [PDF] Ecology 91: 2385-2393.

*Pohlman, J.W., J.E. Bauer, E.A. Canuel, K. Grabowski, D. Knies, C.S. Mitchell, M.J. Whiticar and R.B. Coffin. 2009. Methane sources in gas hydrate-bearing cold seeps: Evidence from radiocarbon and stable isotopic signatures. [PDF] Marine Chemistry 115: 102-109.

— ranked one of the top 25 most highly cited articles in marine chemistry for 2010 by Science Direct.

*Loh, A.N., E.A. Canuel and J.E. Bauer. 2008. Potential source and diagenetic signatures of oceanic dissolved and particulate organic matter as distinguished by lipid biomarker distributions. [PDF] Marine Chemistry 112: 189-202.

*Wozniak, A.S., J.E. Bauer, R.L. Sleighter, R.M. Dickhut and P.G. Hatcher. 2008. Molecular characterization of aerosol-derived water soluble organic carbon using ultrahigh resolution electrospray ionization Fourier transform ion cyclotron resonance mass spectrometry. [PDF] Atmospheric Chemistry and Physics 8: 5,099-5,111.

Druffel, E.R.M., J.E. Bauer, S. Griffin, S.R. Beaupré and J. Hwang. 2008. Dissolved inorganic radiocarbon in the North Pacific Ocean and Sargasso Sea. [PDF] Deep-Sea Research-I 55: 451-459.

Longworth, B.E., S.T. Petsch, P.A. Raymond and J.E. Bauer. 2007. Linking lithology and land use to sources of dissolved and particulate organic matter in headwaters of a temperate, passive-margin river system. [PDF] Geochimica et Cosmochimica Acta 71: 4233-4250.

–Supplemental Image1 and Image2 for this paper

Bauer, J.E.M. Goni and B. McKee. 2008. North American Rivers and Estuaries. [PDF] In: B. Hales, ed. “North American Continental Margins”, Oregon State University Press, 110pp.

Bauer, J.E. 2007. Nature Journal Club: A marine scientist marvels at connections between the cold war and mudflat worms. [PDF] Nature 446: 351.

— invited contribution by the editors of Nature.

*McCallister, S.L., J.E. Bauer, H.W. Ducklow and E.A. Canuel. 2006. Sources of estuarine dissolved and particulate organic matter: A multi-tracer approach. [PDF] Organic Geochemistry 37: 454-468.

*Loh, A.N., J.E. Bauer and E.A. Canuel. 2006. Dissolved and particulate organic matter source-age characterization in the upper and lower Chesapeake Bay: A combined isotope and biochemical approach. [PDF] Limnology and Oceanography 51: 1421-1431.

Hwang, J., E.R.M. Druffel and J.E. Bauer. 2006. Incorporation of aged dissolved organic carbon (DOC) onto oceanic particulate organic carbon (POC): An experimental approach using carbon isotopes. [PDF] Marine Chemistry 98: 315-322.

*McCallister, S.L., J.E. Bauer, H.W. Ducklow and E.A. Canuel. 2006. Bioreactivity of estuarine dissolved organic matter: A combined geochemical and microbiological approach. [PDF] Limnology and Oceanography 51: 94-100.

*McCallister, S.L., J.E. Bauer, J. Kelly, and H.W. Ducklow. 2005. Effects of sunlight on decomposition of estuarine dissolved organic C, N and P and bacterial metabolism. [PDF] Aquatic Microbial Ecology 40: 25-35.

Druffel, E.R.M., J.E. Bauer and S. Griffin. 2005. Input of particulate organic and dissolved inorganic carbon from the Amazon to the Atlantic Ocean. [PDF] Geochemistry, Geophysics, Geosystems 6, Q03009.

Supplemental Materials for this paper

*Raymond, P.A., J.E. Bauer, N. Caraco, J.J. Cole, B. Longworth and S. Petsch. 2004. Controls on the variability of organic and dissolved inorganic carbon age in northeast U.S. rivers. [PDF] Marine Chemistry 92: 353-366.

Hwang, J., E.R.M. Druffel, S. Griffin, K.L. Smith, Jr., R.J. Baldwin, and J.E. Bauer. 2004. Temporal variability of Δ14C, δ13C and C/N in sinking POC at a deep time-series station in the Northeast Pacific Ocean [PDF] Global Biogeochemical Cycles 18: GB4015, doi:10.1029/ 2004GB002221.

Supplemental Materials for this paper

*Loh, A.N., J.E. Bauer, and E.R.M. Druffel. 2004. Variable aging and storage of dissolved organic components in the open ocean. [PDF] Nature 430: 877-881.

Supplemental Materials for this paper

*McCallister, S.L., J.E. Bauer, J. C. Cherrier and H.W. Ducklow. 2004. Assessing sources and ages of organic matter supporting river and estuarine bacterial production: a multiple isotope (Δ14C, δ13C and δ15N) approach. [PDF] Limnology and Oceanography 49: 1687-1702.

— recipient of the 2006 Raymond L. Lindeman Award (American Society of Limnology and Oceanography)

*Cherrier, J.C. and J.E. Bauer. 2004. Bacterial utilization of transient plankton-derived dissolved organic carbon and nitrogen inputs in surface ocean waters. [PDF] Aquatic Microbial Ecology 35: 229-241.

Coale, K.H., K. S. Johnson, F. P. Chavez, K. O. Buesseler, R. T. Barber, M. A. Brzezinski, W. P. Cochlan, F. J. Millero, P. G. Falkowski, J.E. Bauer and others. 2004. Southern Ocean iron enrichment experiment: Carbon cycling in high- and low-Si waters. [PDF] Science 304: 408-414.

Supplemental Materials for this paper

Druffel, E.R.M., J.E. Bauer, S. Griffin and J. Hwang.  2003. Penetration of anthropogenic carbon into organic particles of the deep ocean. [PDF] Geophysical Research Letters 30: 1744, doi:10.1029/2003GL017423.

Bauer, J.E., E.R.M. Druffel, D.M. Wolgast and S. Griffin. 2002. Temporal and regional variability in sources and cycling of DOC and POC in the northwest Atlantic continental shelf and slope. [PDF] Deep-Sea Research-II 49: 4,387-4,419.

Verity, P.G., J.E. Bauer, C.N. Flagg, D.J. DeMaster, and D.J. Repeta. 2002. The Ocean Margins Program: an interdisciplinary study of carbon sources, transformation and sinks in a temperate continental margin system. [PDF] Deep-Sea Research-II 49: 4,273-4,295.

Bauer, J.E. 2002. Biogeochemistry and cycling of carbon in the northwest Atlantic continental margin: findings of the Ocean Margin Program. [PDF] Deep-Sea Research-II 49: 4,271-4,272

Bauer, J.E. 2002. DOM Isotopic Composition. [PDF] In: D.A. Hansell and C.A. Carlson, Eds., “Biogeochemistry of Marine Dissolved Organic Matter” [PDF], Elsevier Science Publishers, pp. 405-453.

Bauer, J.E., E.R.M. Druffel, D.M. Wolgast and S. Griffin. 2001. Sources and cycling of dissolved and particulate organic radiocarbon in the northwest Atlantic continental margin. [PDF] Global Biogeochemical Cycles 15(3): 615-636.

*Raymond, P.A. and J.E. Bauer. 2001. DOC cycling in a temperate estuary: a mass balance approach using natural 14C and 13C. [PDF] Limnology and Oceanography 46:655-667.

Yager, P.L., T.L. Connelly, B Mortazavi, K.E. Wommack, N. Bano, J.E. Bauer, S. Opsahl and J.T. Hollibaugh. 2001. Dynamic bacterial and viral response to an arctic algal bloom at sub-zero temperatures. [PDF] Limnology and Oceanography 46:790-801.

*Raymond, P.A. and J.E. Bauer. 2001. Use of 14C and 13C natural abundances for evaluating freshwater, estuarine and coastal organic matter sources and cycling. [PDF] Organic Geochemistry 32: 469-485.

*Raymond, P.A. and J.E. Bauer. 2001. Riverine export of aged terrestrial organic matter to the North Atlantic Ocean. [PDF] Nature 409: 497-500.

— featured as a Nature News and Views article, “Carbon cycle: The age of river carbon” by W. Ludwig.

— featured in Scientific American, April 28, 2001

*Raymond, P.A., J.E. Bauer, and J.J. Cole. 2000. Atmospheric CO2 evasion, dissolved inorganic carbon production, and net heterotrophy in the York River estuary. [PDF] Limnology and Oceanography 45: 1,707-1,717.

*Raymond, P.A. and J.E. Bauer.2000. Bacterial consumption of DOC during transport through a temperate estuary. [pdf] Aquatic Microbial Ecology 22: 1-12.

Druffel, E.R.M. and J.E. Bauer. 2000. Radiocarbon distributions in Southern Ocean dissolved and particulate organic matter. [PDF] Geophysical Research Letters 27: 1,495-1,498.

–featured as an Editor’s Choice (Highlights of Recent Literature) in Science, vol. 268 (2000).

*Loh, A.N. and J.E. Bauer. 2000. Distributions, partitioning, and fluxes of dissolved and particulate organic C, N, and P in the eastern north Pacific and Southern Oceans. [PDF] Deep-Sea Research I 47: 2,287-2,316.

Ducklow, H.W., G.L. Schultz, P. R. Raymond, J.E. Bauer and F.-K. Shiah. 2000. Bacterial dynamics in large and small estuaries [PDF] In: CR. Bell, M. Brylinsky and P. Johnson-Green, Eds., Microbial Biosystems-New Frontiers,  Proceedings, 8th International Symposium on Microbial Ecology, pp. 105-112.

*Cherrier, J.C., J.E. Bauer, E.R.M. Druffel, R. B. Coffin and J. Chanton. 1999. Radiocarbon in marine bacteria: Evidence for the ages of assimilated carbon. [PDF] Limnology and Oceanography 44: 730-736.

— recipient of the 2000 Raymond L. Lindeman Award (American Society of Limnology and Oceanography).

Bauer, J.E., E.R.M. Druffel, P.M. Williams, D.M. Wolgast and S. Griffin. 1998. Temporal variability in dissolved organic carbon and radiocarbon in the eastern north Pacific Ocean. [PDF] Journal of Geophysical Research 103(C2): 2867-2881.

Druffel, E.R.M., J.E. Bauer, S. Griffin, X.-C. Wang and D.M. Wolgast. 1998. Distribution of particulate organic radiocarbon in the water column from the upper slope to the abyssal Northeastern Pacific Ocean. [PDF] Deep-Sea Research II 45: 667-687.

Masiello, C.A., E.R.M. Druffel and J.E. Bauer. 1998. Physical controls on dissolved inorganic radiocarbon variability in the California Current. [PDF] Deep-Sea Research II 45: 617-642.

Wolgast, D.M., A. Carlucci and J.E. Bauer. 1998. Nitrate respiration associated with detrital aggregates in aerobic bottom waters of the abyssal NE Pacific. [PDF] Deep-Sea Research II 45: 881-892.

Bauer, J.E., D.W. Wolgast, E.R.M. Druffel, S. Griffin and C.A. Masiello. 1998. Distributions of dissolved organic and inorganic carbon and radiocarbon in the eastern North Pacific continental margin. [PDF] Deep-Sea Research II 45: 689-713.

Bianchi, T.S., J.E. Bauer, E.R.M. Druffel and C.D. Lambert. 1998. Pyrophaeophorbide-a as a tracer of suspended particulate organic matter from the NE Pacific continental margin. [PDF] Deep-Sea Research II 45: 715-731.

Bauer, J.E. and E.R.M. Druffel. 1998. Ocean margins as a significant source of organic matter to the deep open ocean. [PDF]Nature 392: 482-485.

Eglinton, T.E., B. Benitez-Nelson, A. Pearson, A. McNichol, J.E. Bauer and E.R.M. Druffel. 1997. Variability in radiocarbon ages of individual organic compounds from marine sediments. [PDF] Science 277: 796-799.

*Cherrier, J.C., J.E. Bauer and E.R.M. Druffel.  1996. Utilization and turnover of labile dissolved organic matter by bacterial heterotrophs in eastern North Pacific surface waters. [PDF] Marine Ecology Progress Series 139: 267-279.

Eglinton, T.I., L.I. Aluwihare, J.E. Bauer, E.R.M. Druffel and A.P. McNichol. 1996.  Gas chromatographic isolation of individual compounds from complex matrices for radiocarbon dating. [PDF] Analytical Chemistry 68: 904-912.

Druffel, E.R.M., J.E. Bauer, P.M. Williams, S. Griffin and D.W. Wolgast. 1996. Seasonal variability of particulate organic radiocarbon in the northeast Pacific. [PDF] Journal of Geophysical Research 101: 20,543-20,552.

Powell, R.T., W.M. Landing and J.E. Bauer. 1996. Colloidal trace metals, organic carbon and nitrogen in a southeastern U.S. estuary. [PDF] Marine Chemistry 55: 165-176.

Buesseler, K., J.E. Bauer, and others. 1996. An intercomparison of cross-flow filtration techniques used for sampling marine colloids: Overview and organic carbon results. [PDF] Marine Chemistry 55: 1-31.

Bauer, J.E.,  K.C. Ruttenberg, D.M. Wolgast, E. Monaghan and M.K. Schrope. 1996. Cross-flow filtration of dissolved and colloidal nitrogen and phosphorus in seawater: Results from an intercomparison study. [PDF] Marine Chemistry 55: 33-52.

Bauer, J.E., C.E. Reimers, E.R.M. Druffel and P.M. Williams. 1995. Isotopic constraints on carbon exchanges between deep ocean sediments and seawater. [PDF] Nature 373: 686-689.

Montagna, P.A., J.E. Bauer, D. Hardin and R.B. Spies. 1995. Meiofaunal and microbial tropic interactions in a natural submarine hydrocarbon seep. [PDF] Vie et Milieu 45: 17-25.

Chanton, J.P., J.E. Bauer, and others. 1995. Radiocarbon evidence for the substrates supporting methane formation within northern Minnesota peatlands. [PDF] Geochimica et Cosmochimica Acta 59: 3,663-3,668.

Bebout, B.M., H.W. Paerl, J.E. Bauer, D.E. Canfield and D.J. DesMarais. 1994. Nitrogen cycling in microbial mat communities: the quantitative importance of N-fixation and other sources of N for primary productivity. [PDF]  In: L. Stal and P. Caumette (eds.), Microbial Mats, Springer-Verlag, Berlin. pp. 265-271.

Bauer, J.E., M.L. Occelli, P.M. Williams and P.C. McCaslin. 1993. Heterogeneous catalyst structure and function: Review and implications for the analysis of dissolved organic carbon and nitrogen in natural waters. [PDF] Marine Chemistry 41:75-89.

Williams, P. M., J. E. Bauer, K. R. Robertson, D. M. Wolgast and M.L. Occelli. 1993. Report on DOC and DON measurements at Scripps Institution of Oceanography, 1988-1991. [PDF] Marine Chemistry 41: 271-281.

Williams, P.J. LeB., J.E. Bauer, R. Benner, J. Hegeman, V. Ittekkot, A. Miller, B. Norman, Y. Suzuki, P Wangersky and M. McCarthy. 1993. Measurement of dissolved organic carbon and nitrogen in natural waters: DOC subgroup report. [PDF] Marine Chemistry 41: 11-21.

Capone, D.G. and J.E. Bauer. 1992. Microbial processes in coastal pollution. [PDF] In: (R. Mitchell, ed.) Environmental Microbiology, John Wiley and Sons, New York. pp. 191-238.

Bauer, J.E., P.M. Williams and E.R.M. Druffel. 1992. Recovery of sub-milligram quantities of carbon dioxide from gas streams by molecular sieve for subsequent determination of isotopic natural abundances (13C and 14C). [PDF] Analytical Chemistry 64: 824-827.

Bauer, J.E., P.M. Williams and E.R.M. Druffel. 1992. 14C activity of dissolved organic carbon fractions in the central North Pacific and Sargasso Sea. [PDF] Nature 357: 667-670.

Druffel, E.R.M., P.M. Williams, J.E. Bauer and J. Ertel. 1992. Cycling of dissolved and particulate organic matter in the open ocean. [PDF] Journal of Geophysical Research 97: 15,639-15,659.

Bauer, J.E., R.I. Haddad and D.J. Des Marais. 1991. Method for determining stable isotope ratios of dissolved organic carbon in interstitial and other natural marine waters. [PDF] Marine Chemistry 33: 335-351.

Bauer, J.E., R.B. Spies, J.S. Vogel, D.E. Nelson and J.R. Southon. 1990. Radiocarbon evidence of fossil-carbon cycling in sediments of a nearshore hydrocarbon seep. [PDF] Nature 348: 230-232.

Spies, R.B., J.E. Bauer and D. Hardin. 1989. Stable isotope study of sedimentary carbon utilization by Capitella spp.: effects of two carbon sources and geochemical conditions during their diagenesis. [PDF] Marine Biology 101: 69-74.

Montagna, P.A., J.E. Bauer, R.B. Spies and D. Hardin. 1989. Vertical distribution of microbial and meiofaunal populations in sediments of a coastal marine petroleum seep. [PDF] Journal of Marine Research 47: 657-680.

Montagna, P.A. and J.E. Bauer. 1988. Partitioning radiolabeled thymidine uptake by bacteria and meiofauna using metabolic blocks and poisons in benthic feeding studies. [PDF] Marine Biology 98: 101-110.

Bauer, J.E., R. Kerr, M.F. Bautista, C.J. Decker and D.G. Capone. 1988. Stimulation of microbial activities and polycyclic aromatic hydrocarbon degradation in marine sediments inhabited by Capitella capitata. [PDF] Marine Environmental Research 25: 63-84.

Bauer, J.E. and D.G. Capone. 1988. Effects of co-occurring aromatic hydrocarbons on the degradation of individual polycyclic aromatic hydrocarbons in marine sediment slurries. [PDF] Applied and Environmental Microbiology 54: 1,649-1,655.

Bauer, J.E., P.A. Montagna, R.B. Spies, D. Hardin and M.C. Prieto. 1988. Microbial biogeochemistry and heterotrophy in sediments of a marine hydrocarbon seep. [PDF] Limnology and Oceanography 33: 1,493-1,513.

Montagna, P.A., J.E. Bauer, J. Toal, D. Hardin and R.B Spies. 1987. Temporal variability and the relationship between benthic meiofauna and microbes of a natural coastal petroleum seep. [PDF] Journal of Marine Research 45: 761-789.

Montagna, P.A., J.E. Bauer, M.C. Prieto, R.B. Spies and D. Hardin. 1986. Benthic metabolism at a natural California petroleum seep. [PDF] Marine Ecology Progress Series 34: 31-40.

Bauer, J.E. and D.G. Capone. 1985. Effects of four aromatic organic pollutants on microbial glucose metabolism and thymidine incorporation in marine sediments. [PDF] Applied and Environmental Microbiology 49: 828-835.

Bauer, J.E. and D.G. Capone. 1985. Degradation and mineralization of the polycyclic aromatic hydrocarbons anthracene and naphthalene in intertidal marine sediments. [PDF] Applied and Environmental Microbiology 50: 81-90.