The Anderson Lab has produced several publicly accessible tools useful for data analysis. They are listed below, crediting the researchers who use and develop them. Contact emails are included for those interested in learning more.
SNPMap – An interactive visualization tool for analyzing the individual pattern of polymorphic mutations across 21 clinical isolates of Candida albicans
Contact: Matthew Anderson (anderson.3196@osu.edu)
RNA-Seq_Analysis – Analysis of RNA-Seq for DE Genes in Candida albicans
Contact: Matthew Anderson (anderson.3196@osu.edu)
CAlbicansR – R package to analyze biological datasets in Candida albicans
Contact: Matthew Anderson (anderson.3196@osu.edu)
Detection scripts for analysis of agar filamentation, adhesion, and invasion as well as filamentation in liquid.
Contact: Matthew Dunn (dunn.658@osu.edu)
Code used for data organization and analysis of agar filamentation, adhesion, and invasion as well as filamentation in liquid:
https://code.osu.edu/fillinger.22/MIPAR_FWAIBL_Sorted_Score_Files
https://code.osu.edu/fillinger.22/MIPAR_FWAIBL_Normalized_Figures
https://code.osu.edu/fillinger.22/MIPAR_FWAIBL_R2R_Additive_Correlations
https://code.osu.edu/fillinger.22/mipar_fwaibl-r2r-weighted_phenotypes
Contact: Robert Fillinger (fillinger.22@osu.edu)