Publications

Current Pubmed Listing, Current Google Scholar Listing

46. Hudoba MW, Luo Y, Zacharias A, Poirier MG, Castro CE. Dynamic DNA Origami Device for Measuring Compressive Depletion Forces. ACS Nano. 2017 Jun 9. doi: 10.1021/acsnano.6b07097.

45. Gibson MD, Gatchalian J, Slater A, Kutateladze TG, Poirier MG. PHF1 Tudor and N-terminal domains synergistically target partially unwrapped nucleosomes to increase DNA accessibility. Nucleic Acids Res. 2017;Jan 12. pii: gkw1320. doi: 10.1093/nar/gkw1320.

44. Gibson MD, Brehove M, Luo Y, North J, Poirier MG. Methods for Investigating DNA Accessibility with Single Nucleosomes. Methods Enzymol. 2016;581:379-415.

43. Le JV, Luo Y, Darcy MA, Lucas CR, Goodwin MF, Poirier MG, Castro CE. Probing Nucleosome Stability with a DNA Origami Nanocaliper. ACS Nano 2016 Jul 26;10(7):7073-84.

42. Teeling-Smith RM, Jung YW, Scozzaro N, Cardellino J, Rampersaud I, North JA, Šimon M, Bhallamudi VP, Rampersaud A, Johnston-Halperin E, Poirier MG, Hammel PC. NV center electron paramagnetic resonance of a single nanodiamond attached to an individual biomolecule. Biophy. J. 2016 May 10;110(9):2044-52.

41. Bhallamudi VP, Xue R, Purser CM, Banasavadi-Siddegowda YK, Kaur B, Hammel PC, Poirier MG, Lannutti JJ, and Pandian RP. Nanofiber-based paramagnetic probes for rabip, real-time biomedical oximetry. Biomedical Microdevices 2016. Apr;18(2):38.

40. Wike CL, Graves HK, Hawkins R, Gibson MD, Ferdinand MB, Zhang T, Chen Z, Hudson DF, Ottesen JJ, Poirier MG, Schumacher J, Tyler JK. Aurora-A mediated histone H3 phosphorylation of threonine 118 controls condensin I and cohesin occupancy in mitosis. eLIFE 2016;10.7554/eLife.11402.

39. Klein BJ, Muthurajan UM, Lalonde ME, Gibson MD, Andrews FH, Hepler M, Machida S, Yan K, Kurumizaka H, Poirier MG, Côté J, Luger K, Kutateladze TG. Bivalent interaction of the PZP domain of BRPF1 with the nucleosome impacts chromatin dynamics and acetylation. Nucleic Acids Res. 2016 Jan 8;44(1):472-84. doi: 10.1093/nar/gkv1321.

38. Bernier M, Luo Y, Nwokelo KC, Goodwin M, Dreher SJ, Zhang P, Parthun MR, Fondufe-Mittendorf Y, Ottesen JJ and Poirier MG. Linker histone H1 and H3K56 acetylation are antagonistic regulators of nucleosome dynamics. Nat Commun. 2015 Dec 9;6:10152.

37. Chatterjee N, North JA, Dechassa ML, Manohar M, Prasad R, Luger K, Ottesen JJ, Poirier MG and Bartholomew B. Histone Acetylation near the nucleosome dyad axis enhances nucleosome disassembly by RSC and SWI/SNF. Mol Cell Biol. 2015 Dec 1;35(23):4083-92.

36. Brehove M, Wang T, North J, Luo Y, Dreher SJ, Shimko JC, Ottesen JJ, Luger K, Poirier MG. Histone core phosphorylation regulates DNA accessibility. J. Biol. Chem. 2015 Sep 11;290(37):22612-21.

35. Bowman GD, Poirier MG. Post-translational modifications of histones that influence nucleosome dynamics. Chem Rev. 2015 Mar 25;115(6):2274-95.

34. Luo Y, North JA, Poirier MG. Single molecule fluorescence methodologies for investigating transcription factor binding kinetics to nucleosomes and DNA. Methods. 2014 Oct 7. pii: S1046-2023(14)00317-X. doi: 10.1016/j.ymeth.2014.09.011.

33. North JA, Šimon M, Ferdinand MB, Shoffner MA, Picking JW, Howard CJ, Mooney AM, van Noort J, Poirier MG and Ottesen JJ. Histone H3 phosphorylation near the nucleosome dyad alters chromatin structure. Nucleic Acids Res. 2014 Apr;42(8):4922-33. doi:10.1093/nar/gku150.

32. Luo Y, North JA, Rose SD and Poirier MG. Nucleosomes Accelerate Transcription Factor Dissociation. Nucleic Acids Res. 2014 Mar;42(5):3017-27. doi: 10.1093/nar/gkt1319.

31. Musselman CA, Gibson MD, Hartwick EW, North JA, Gatchalian J, Poirier MG, and Kutateladze TG. Binding of PHF1 Tudor to H3K36me3 enhances nucleosome accessibility. Nature Comm. 2013 Dec 19;4:2969. doi: 10.1038/ncomms3969.

30. Gao M, Nadaud PS, Chakraborty S, North JA, Bernier M, Poirier MG, Jaroniec CP*. Flexible histone tails in large nucleosome arrays probed by magic angle spinning NMR spectroscopy. J Am Chem Soc. 2013 Oct 16;135(41):15278-81.

29. North JA, Amunugama R, Klajner M, Bruns AN, Poirier MG, Fishel R*. ATP-dependent nucleosome unwrapping catalyzed by human RAD51. Nucleic Acids Res. 2013 Aug 1;41(15):7302-12.

28. Law YK, Forties RA, Liu X, Poirier MG, Kohler B. Sequence-dependent thymine dimer formation and photoreversal rates in double-stranded DNA. Photochem Photobiol Sci. 2013 Aug;12(8):1431-9.

27. Eidahl JO, Crowe BL, North JA, McKee CJ, Shkriabai N, Feng L, Plumb M, Graham RL, Gorelick RJ, Hess S, Poirier MG, Foster MP, Kvaratskhelia M. Structural basis for high-affinity binding of LEDGF PWWP to mononucleosomes. Nucleic Acids Res. 2013 Apr 1;41(6):3924-36.

26. Shimko JC, Howard CJ, Poirier MG and Ottesen JJ. “The Preparation of Semisynthetic and Fully Synthetic Histones H3 and H4 to Introduce Modifications in the Nucleosome Core”, Methods Mol. Biol. 2013;981:177-92.

25. Sen P, Vivas P, Dechassa, ML, Mooney AM, Poirier MG and Bartholomew B. The SnAC domain of SWI/SNF is a histone anchor required for remodeling. Mol Cell Biol. 2013 Jan; 33(2):360-70.

24. North JA, Shimko JC, Javaid S, Mooney AM, Shoffner MA, Rose SD, Bundschuh R, Fishel R, Ottesen JJ, Poirier MG. Regulation of the nucleosome unwrapping rate controls DNA accessibility. Nucleic Acids Res 2012 Nov 1;40(20):10215-27.

23. Kodgire P, Mukkawar P, North JA, Poirier MG, Storb U. Nucleosome stability dramatically impacts the targeting of somatic hypermutation. Mol Cell Biol. 2012 May;32(10):2030-40.

22. Chen A, Vieira G, Henighan T, Howdyshell M, North JA, Hauser AJ, Yang FY, Poirier MG, Jayaprakash C and Sooryakumar R. Regulating Brownian Fluctuations with Tunable Microscopic Magnetic Traps. Phys Rev Lett. 2011 Aug. 18; 107(8): 87206.

21. Simon M., North JA, Shimko JC, Forties RA, Ferdinand MA, Manohar M, Zhang M, Fishel R, Ottesen JJ and Poirier MG. Histone Fold Modifications Control Nucleosome Unwrapping and Disassembly. Proc. Nat. Acad. Sci, (USA). 2011 Aug 2;108(31):12711-6.

20. Forties RA, North JA, Javaid S, Tabba OP, Fishel R, Poirier MG and Bundschuh R. A Quantitative Model of Nucleosome Dynamics. Nucleic Acids Res. 2011 Oct;39(19):8306-13.

19. North JA, Javaid S, Ferdinand MB, Chatterjee N, Picking JW, Shoffner M, Nakkula RJ, Bartholomew B, Ottesen JJ, Fishel, Poirier MG. Phosphorylation of Histone H3(T118) Alters Nucleosome Dynamics and Remodeling. Nucleic Acids Res. 2011 Aug; 39(15): 6465-74.

18. Shimko JC, North JA, Poirier MG and Ottesen JJ. Preparation of fully synthetic histone H3 reveals that acetyl-lysine 56 facilitates protein binding within nucleosomes. J Mol Biol. 2011 Apr 29; 408(2): 187-204.

17. Wong J, Poirier MG, Chatenay D and Robert J. Plasmid copy number noise in monoclonal populations of bacteria. Phys Rev E. 2010 Jan;81(1 Pt 1):011909.

16. Javaid S, Manohar M, Punja N, Mooney A, Ottesen JJ, Poirier MG, and Fishel R. Nucleosome remodeling by hMSH2-hMSH6. Mol Cell. 2009 Dec 24;36(6):1086-94.

15. Poirier MG, Oh E, Tims H, and Widom J. Dynamics and function of compact nucleosome arrays. Nat Struct Mol Bio. 2009 Sep;16(9):938-44.

14. Manohar M, Mooney AM, North JA, Nakkula RJ, Picking JW, Edon A, Fishel R, Poirier MG and Ottesen JJ. Acetylation of histone H3 at the nucleosome dyad alters DNA-histone binding. J Biol Chem. 2009 Aug 28;284(35):23312-21.

13. Forties RA, Bundschuh R, Poirier MG. The flexibility of locally melted DNA. Nucleic Acids Res. 2009 Aug;37(14):4580-6.

12. Shen HM, Poirier MG, Allen MJ, North J, Lai R, Widom J, Storb U. The Activation Induced Cytidine Deaminase (AID) efficiently targets DNA in nucleosomes, but only during transcription. J Exp. Med. 2009 May 11;206(5):1057-71.

11. Poirier MG, Bussiek M, Langowski J, Widom J. Spontaneous access to DNA target sites in folded chromatin fibers. J Mol Biol. 2008 Jun 13;379(4):772-86.

10. Poirier MG and Marko JF. Micromechanical studies of mitotic chromosomes. Curr Top Dev Biol. 2003, 55:75-141.

9. Poirier MG and Marko JF. Micromechanics of chromatin and chromosomes Biochem Cell Biol. 2003 Jun;81(3):209-20.

8. Poirier MG and Marko JF. Micromechanical properties of mitotic chromosomes. J Musc Res Cell Motil. 2003, 23, 409-431.

7. Poirier MG and Marko JF. Mitotic chromosomes are chromatin networks without an internal protein scaffold. Proc Natl Acad Sci USA 2002 Nov 26; 99, 15393-15397.

6. Sarkar A, Eroglu S, Poirier MG, Nemani A, Gupta P and Marko JF. Dynamics of chromosome compaction during mitosis, Exp Cell Res. 2002 Jul 1;277(1):48-56.

5. Poirier MG and Marko JF. Effect of internal friction on biofilament dynamics Phys Rev Lett. 2002 Jun 3; 88(22):228103.

4. Poirier MG, Eroglu S and Marko JF, The bending rigidity of mitotic chromosomes Mol Biol Cell. 2002 Jun 13: (6):2170-2179.

3. Poirier MG, Monhait T and Marko JF. Reversible hypercondensation and decondensation of mitotic chromosomes studied using combined chemical-micromechanical techniques. J Cell Biochem. 2002; 85:422-424.

2. Poirier MG, Nemani A, Gupta P, Eroglu S and Marko JF. Probing chromosome structure with dynamic force relaxation Phys Rev Lett. 2001 Jan 8; 86, 360-363.

1. Poirier M, Eroglu S, Chatenay D, and Marko JF. Reversible and irreversible unfolding of mitotic newt chromosomes by applied force Mol Biol Cell. 2000 Jan; 11, 269-276.

Leave a Reply

Your email address will not be published. Required fields are marked *